Javan-Nikkhah, M., Hedjaroude, G.A., Sharifi-Tehrani, A. and Elahinia, S.A. 1999. Rice stem rot in Guilan province, Iran. Iranian Journal of Plant Pathology 34 (3,4): 76-83. [In Persian with English abs.]
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Javan-Nikkhah, M., Hedjaroude, G.A., Sharifi-Tehrani, A. and Elahinia, S.A. 2001. Biology of Magnapothe salvinii, the causal fungus of rice stem rot in Guilan province, Iran. Iranian Journal of Plant Pathology 37 (1,2): 51-66. [In Persian with English abs.]
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Javan-Nikkhah, M., Hedjaroude, G.A., Sharifi-Tehrani, A. and Elahinia, S.A. 2002. Study on the tolerance of several varieties and lines of rice to stem rot fungus, Magnapothe salvinii in Guilan province, Iran. J. Sci & Tech. Agric. & Nat. Resour. 5: 189-196. [In Persian with English abs.]
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Javan-Nikkhah, M., Hedjaroude, Gh.A., Sharifi-Tehrani, A. and Okhovvat, S. M. 2003. Study on pathogenic diversity in populations of Magnaporthe grisea, causal agent of rice blast disease in Guilan province, Iran. Iranian Journal of Agricultural Science 34 (3): 647-658. [In Persian with English abs.]
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Javan-Nikkhah, M., B.A. McDonald, S. Banke and G.A. Hedjaroude. 2004 Genetic structure of Iranian Pyricularia grisea populations based on rep-PCR fingerprinting. European Journal of Plant Pathology 110: 909-919. JCR
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Mousanejad, S., Mohammadi Goltappeh, E. and Javan-Nikkhah M. 2004. Study on fertility status and distribution of mating type alleles of Magnaporthe grisea, causal agent of rice blast disease in Guilan province, Iran. Iranian Journal of Plant Pathology 40 (3,4): 201-220. [In Persian with English abs.]
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Mousanejad, S., Javan-Nikkhah M. And Mohammadi Goltappeh, E. 2005. Characterization of vegetative compatibility groups in Magnaporthe grisea poulation in Guilan province, Iran. Iranian Journal of Agricultural Science 36 (2): 305-317. [In Persian with English abs.]
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Javan-Nikkhah, M., Hedjaroude, Gh.A., Sharifi-Tehrani, A. and Okhovvat, S. M. 2006. Identification of clonal lineages in population of Magnaporthe grisea, by using rep-PCR and determination of their distribution in Guilan province, Iran. Iranian Journal of Agricultural Science 37 (6): 1001-1015. [In Persian with English abs.]
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Ahmadzadeh M., Afsharmanesh H., Javan-Nikkhah M. and Sharifi Tehrani A. 2006. Identification of some molecular triats in flouresecnt pseudomonads with antifungal activity. Iranian Journal of Biotechnology 4 (4): 245 – 253.
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Eva H. Stukenbrock, Soren Banke, Mohammad Javan–Nikkhah and Bruce A. McDonald. 2007. Origion and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation. Molecular Biology and Evolution 24 (2): 398 – 411. JCR
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Heidarian R., Javan-Nikkhah M. and Sharifi Tehrani A. 2007. Study on genetic diversity of Aspergillus flavus based on determination of vegetative compatibility groups in pistachio cultivating area of Kerman province, Iran. Iranian Journal of Agricultural Science 38 (1): 173-179. [In Persian with English abs.]
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Amirdehi E., Khodaparast S. A. and Javan-Nikkhah M. 2007. Study on fertility status and distribution of mating type alleles of Magnaporthe grisea, causal agent of rice blast disease in Mazandaran province, Iran. Iran. Iranian Journal of Agricultural Science 38 (2): 297-303. [In Persian with English abs.]
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Mirzadi-Gohari A.. Javan-Nikkhah M. Hedaroude Gh. A., Abbasi M., Rahjoo V. and Sedaghat N. 2008. Genetic diversity of Fusarium verticilioides isolates from maize in Iran based on vegetative compatibility grouping. Journal of Plant Pathology 90 (1): 113-116. JCR
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Rahjoo V., Zad J., Javan-Nikkhah, M., Mirzadi-Gohari A., Okovvat S. M., Bihamta M. R., Razzaghian M., Klemsdal S. 2008. Morphological and Molecular identification of Fusarium isolated from maize ears in Iran. Journal of Plant Pathology 90 (1): 113-116. JCR
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Abbas Zadeh M., Javan-Nikkhah M., Padasht Dehahi F. and Mousanejad S. 2007. Sexual fertility and mating types of Gibberella fujikuroi species complex, the cause of Bakanae disease and foot rot in Guilan province, Iran. Iranian Journal of Agricultural Science 38 (4): 685-692 . [In Persian with English abs.]
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Babri M., Javan-Nikkhah M., Taheri H. Mohammad Alian Y. and Fattahi Moghaddam Javad. 2008. Etiological study and dispersion appointment of anthracnose disease agent of citrus in Mazandaran prvince. Iranian Journal of Plant Pathology 44: 37-52. [In Persian with English abs.]
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Alian S. A., Javan-Nikkhah M., Aminian H. And Khosravi V. 2008. Investigation on mating populations and mating types of Gibberella fujikuroi, the causal agent of rice bakanae disease in Mazandaran province. Iranian Journal of Plant Pathology 44: 121-137. [In Persian with English abs.]
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Hemmati R., Javan – Nikkhah M. and Linde C. 2009. Population genetic structure of Sclerotinia sclerotiorum (Libe) de Barry on canola in Iran. European Journal of Plant Pathology 125:617–628 JCR
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Motallebi P., Javan-Nikkhah M. Okhovvat S. M., Fotouhifar K. B., and Bargnil M. 2009. Vegetative compatibility groups within Iranian populations of Magnaporthe grisea from rice and some grasses. Journal of Plant Pathology. 91 (2), 469-473 JCR
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Ahmadpour A., Ghosta Y., Javan-Nikkhah M. Fattahi M. R. and Ghazanfari K. 2009. Isolation and pathogenicity tests of Iranian cultures of the shot hole pathogen of Prunus species, Wilsonomyces carpophilus. Australasian Plant Disease Note 4:133–134.
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Motallebi P., Javan-Nikkhah M., Okhovvat S. M. Fotouhifar Kh. B. and Ghazanfari K. 2009. A study on population structure of Magnaporthe grisea (Hebert) Barr isolated from some Poaceae weeds, based on identification of VCGs and rep-PCR DNA fingerprinting. Iranian Journal of Plant Protection 40 (1): 73-84. [In Persian with English abs.]
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Alian S. A., Javan-Nikkhah M., Aminian H. And Khosravi V. 2009. A study of the genetic diversity of Gibberella intermedia, the common causal agent of rice bakanae disease in Mazandaran province, based on vegetative compatibility groups. Iranian Journal of Plant Protection 40 (1): 35-41. [In Persian with English abs.]
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Naeimi Sh., Okhovvat S. M., Javan-Nikkhah M., Kredich L. and Khosravi V. 2009. Frequency and distribution of Trichoderma spp. in the rice (Paddy) fields of Mazandaran province, Iran. Iranian Journal of Plant Protection 40 (2): 79-92. [In Persian with English abs.]
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Padasht Dehkaei F., Okhovvat S. M., Javan-Nikkhah M. and Mahmoudi S. B. 2009. Optimization of inoculation method in sheath blight disease to detect rice cultivars actual reactions in the field. Iranian Journal of Plant Protection 40 (2): 99-108. [In Persian with English abs.]
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Moradzadeh Eskandari M. Javan-Nikkhah M., Zare R., Okhovvat S. M., Moretti A., Suma S. and Stea G. 2009. Study on genetic structure of Fusarium solani populations isolated from potato, cucurbit, bean and chickpea based on FAFLP markers. Iranian Journal of Plant Pathology 45 (3): 189-197. [In Persian with English abs.]
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Babri M., Javan-Nikkhah M., Taheri H. and Mohammad Alian Y. 2009. Comparing virulence of Colletotrichum gloeosporioides Isolates the causal agent of citrus anthracnose in Mazandaran province, Iran. Iranian Journal of Plant Protection 40 (2): 27-33. [In Persian with English abs.]
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Ahmadpour A., Javan-Nikkhah M., Ghosta Y. and Fattahi Moghaddam M. R. 2009. Study on some biological and morphological characterizations of Wilsonomyces carpophilus, the causal agent of shot hole disease of stone fruit trees in West Azerbaijan. Rostaniha 10 (1): 92-109. [In Persian with English abs.]
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Khansari Atigh M., Javan-Nikkhah M. Okhovvat S. M. and Ghazanfari K. 2010. A study on sexual fertility and a determination of vegetative compatibility groups among Glomerella cingulata isolates from citrus trees in Mazandaran province, Iran. Iranian Journal of Plant Protection 41 (1): 71-79. [In Persian with English abs.]
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Mohammadian E. Javan-Nikkhah M. Okhovvat S. M. and Ghazanfari K. 2010. Study on fertility status and determination of frequency of mating type alleles in A and D mating populations of Gibberella fujikuroi from rice and corn based on PCR. Iranian Journal of Plant Protection 41 (1): 135-142. [In Persian with English abs.]
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Afsharmanesh H., Ahmadzadeh M., Javan-Nikkhah M. and Keivan B. 2010. Characterization of the antagonistic activity of a new indogenous strain of Pseudomonas flouresens isolated from onion rhizomorph. Journal of Plant Pathology 92 (1):187-194 JCR
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Karimian B., Javan-Nikkhah M., Abbasi M. and Ghazanfari K. 2010. Genetic diversity of Fusarium oxysporum. Isolated from common bean and distribution of mating type alleles. Iranian Journal of Biotechnology 8 (2):90-97.
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Aghapour B., Fotouhifar K. B. Javan-Nikkhah M., Ahmadpour A. and Aghajani M. A. 2010. The first record of Neurospora tetrasperma (ana. Chrysolina tetrasperma) on Platanus orientalis in Iran. Mycotaxon 111:103-111. JCR
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Alizadeh A. R., Javan-Nikkhah M., Fotouhifar K. B., Rabiei Motlagh E. and Rahjoo V. 2010. Genetic diversity of Fusarium proliferatum populations from Maize, Rice, Onion and Sugarcane in Iran based on Vegetative Compatibility Grouping (VCG). The Plant Pathology Journal 26(3):216-222 (JCR)
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Naeimi Sh., Okhovvat S. M., Javan-Nikkhah M., V?gv?lgyi C., Khosravi V. and Kredics L. 2010. Biological control of Rhizoctonia solani AG1-1A, the causal agent of rice sheath blight with Trichoderma Strains. Phytopathologica Mediteranea 49: 287-300. JCR
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Nourollahi Kh., Javan-Nikkhah M., Naghavi M. R. and Okhovvat S. M. 2010. Identification of pathotypes in populations of Didymella rabiei, the causal agent of chickpea blight in Ilam and Kermanshah provinces. Iranian Journal of Plant Protection 42 (2): 173-192. [In Persian with English abs.]
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Alibakhshi R., Javan-Nikkhah M., Fotouhifar Kh. B., Khosravi V. Zamani, E. and Ghazanfari, K. 2011. Study on effect of hyphal anastomosis between aflatoxigenic and non-aflatoxigenic strains of Aspergillus flavus isolated from pistachio on reduction of aflatoxin production and analysis of produced heterokaryons using rep-PCR. Iranian Journal of Plant Pathology 47(2): 121-133. [In Persian with English abs.]
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Poursaeid R., Javan-Nikkhah M., Fotouhifar Kh. B., Khosravi V. and Ghazanfari, K. 2011. Study on sexual fertility and genetic diversity of Magnaporthe salvinii, causal agent of rice stem rot in northern Iran. Iranian Journal of Plant Pathology 47(2): 107-119. [In Persian with English abs.]
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Nourollahi K., Javan-Nikkhah M., Naghavi M. R. Ellwood S. Lichtenzveig J. and Okhovvat S. M. 2011. Population genetics of Ascochyta rabiei from the western Iranian Ilam and Kermanshah provinces using MAT and SSR markers. Mycological progress 10. 1-7. (JCR)
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Naeimi S., Kocsbue S., Antal Z., Okhovvat S.M., Javan-Nikkhah M., Vagvolgyl C. and Kredics L. 2011. Strain specific SCAR markers for the detection of Trichoderma harzianum AS12-2, a biological control agent against Rhizoctonia solani, the causal agent of rice sheat blight. Acta Biologica Hungaria 62 (1):73-84 JCR
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Ahmadpour A., Heidarian Z., Donyadoost M., and Javan-Nikkhah. 2011. New species of Bipolaris and Curvularia on grass species in Iran. Rostaniha 12 (1): 39-49. [In Persian with English abs.]
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Sedagathi, A., Javan-Nikkhah, M., Fotuhifar, K. B., Zare, R., Kocsubé, S., V?gv?lgyi, Cs. and Varga, J. 2011. Molecular identification of potentially mycotoxigenic black Aspergilli contaminating pistachio nuts in Iran. Acta Alimentaria 40(1):65-70 JCR
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Farzane M., Shi Z. Q., Ghasempour A. R. , Sedaghat N., Ahmadzadeh M., Miraboulfathi M. and Javan-Nikkhah, M. 2011. Aflatoxin B1 degradation by Bacillus subtilis UTBSP1 isolated from pistachio nuts of Iran. Food Control 23: 100-106 JCR
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Mohammadian E., Javan-Nikkhah M., Okhovvat S. M. and Ghazanfari K. 2011. Study on genetic diversity of Gibberella moniliformis and G. intermedia from corn and rice, and determination of fertility status and of mating type alleles. Australian Journal of Crop Science 5(11): 1448-1454. JCR
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Lotfi Miri F., Javan-Nikkhah M., Zamanizadeh H. R. and Padasht Dehkaei F. 2011. Mating populations of Gibberella fujikuroi species complex, the causal agent of rice foot rot in Guilan province, and determination of their vegetative compatibility groups. Iranian Journal of Plant Protection 42 (1): 61-74. [In Persian with English abs.]
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Irani H., Heydari A., Javan-Nikkhah M. and Ibrahimov A. V. 2011. Pathogenicity variation and mycelial compatibility groups in Sclerotinia sclerotiorum. Journal of Plant Protection Research 51 (4): JCR
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Naeimi S., Khodaparast S. A., Javan-Nikkhah M. Vagvolgyi and Kredics L. 2011. Species pattern and phylogenetic relationships of Trichoderma strains in rice fields of Southern Caspian Sea, Iran. Cereal Research Communications 39(4): 560-568. JCR
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Zarrinnia V., Javan-Nikkhah M. Zamanizadeh H. R., Mehrabi R. and Khosravi V. 2011. An investigation of the pathogenicity characteristics of Magnaporthe grisea isolates collected from different host plants from the family Poaceae and race determination of the pathogenic isolates. Iranian Journal of Plant Protection 42 (1): 179-190. [In Persian with English abs.]
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Padasht Dehkaei F., Ceresini P. C., Zala M., Okhovvat S. M., Javan-Nikkhah M. and McDonald B. 2013. Population genetic evidence that basidiospores play an important role in the disease cycle of rice-infecting populations of Rhizoctonia solani AG-1IA in Iran. Plant Pathology 62 (1):49-58 Doi: 10.1111/j.1365-3059.2012.02613.x. JCR
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Stukenbrock E. H., Quaedvlieg W., Javan-Nikkhah M., Zala M., Crous P. W. and McDonald B. A. 2012. Zymoseptoria ardabiliae and Z. pseudotritici, two progenitor species of the septoria tritici leaf blotch fungus Z. tritici (synonym: Mycosphaerella graminicola). Mycologia 104(6):1397–1407 Doi:10.3852/11-374 JCR
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Ahmadpour A., Heidarian Z., Donyadoost Chelan M., Javan-Nikkhah M., Tsukiboshi T. 2012. A new species of Bipolaris from Iran. Mycotaxon 120:301-307. http://dx.doi.org/10.5248/120.301 JCR
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Ahmadpour A., Ghosta Y., Javan-Nikkhah M. Ghazanfari K., and Fattahi M. R. 2012. Study on morphology, pathogenicity and genetic diversity of Wilsonomyces carpophilus isolates, the causal agent of shot hole of stone fruit trees based on RAPD-PCR in Iran. Archives of Phytopathology and Plant Protection:1-11. DOI:10.1080/03235408.2012.721072.
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Bargnil M., Javan-Nikkhah M. Okhovvat S.M. and Ghazanfari K. 2012. A Study on the genetic diversity and sexual fertility Status of Magnaporthe grisea isolates obtained from different eeeds of Poaceae and Rice. Iranian Journal of Plant Protection 43(1):47-61. [In Persian with English abs.]
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Ahmadpour A., Heidarian Z., Karimi S., Tsukiboshi T., Zhang M. and Javan-Nikkhah M. 2012. New species of Bipolaris and Curvularia on grass species in Iran. Rostaniha. 13(1): 69-82. [In Persian with English abs.].
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Momeni H., Javan-Nikkhah M. and Razavi M. 2012. First report of the sexual stage of Pyrenophora triticirepentis in Iran. Iranian Journal of Plant Pathology 47 (4): 169-170. Short Report
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Alizadeh H. R., Behboudi K., Ahmadzadeh M., Javan-Nikkhah M. 2013. Induced systemic resistance in cucumber and Arabidopsis thaliana by the combination of Trichoderma harzianum Tr6 and Pseudomonas sp. Ps14. Biological Control 65(1):14-23 Doi: http://dx.doi.org/10.1016/ j.biocontrol.2013.01.009 JCR
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Nazari S., Javan-Nikkhah M., Fotouhifar K. B. and Khosravi V. 2012. Occurrence of Bipolaris hawaiiensis associated with rice grain in Iran. Iranian Journal of Plant Pathology 47 (4): 477-478. Short Report. [In Persian with English abs.]
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Afsharmanesh H., Ahmadzadeh M., Majdabadi A., Motamedi F., Behboudi K. and Javan-Nikkhah M. 2013. Enhancement of biosurfactants and biofilm production after gamma irradiation-induced mutagenesis of Bacillus subtilis UTB1, a biocontrol agent of Aspergillus flavus. Archives of Phytopathology and Plant Protection Doi: http://dx.doi.org/10.1080/03235408.2013.780374
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Ahmadpour A., Karami S., Heidarian Z. and Javan-Nikkhah M. 2013. Exserohilum rostratum causing sugarcane leaf spot in Iran. Australasian Plant Diseade Notes. DOI 10.1007/s13314-013-0105-y.
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Bozaorgmanesh S., Fotouhifar S. and Javan-Nikkhah M. 2013. Investigation of nit mutant generation in Iranian isolates of Valsa sordida. Journal of Agricultural Technology 9(4): 929-942.
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Momeni H., Javan-Nikkhah M., Razavi M. and Naghavi M. R. 2013. Study of the Population Genetic Structure and Telemorph Production of Pyrenophora tritici-repentis (the Causal Agent of Wheat Tan Spot) in North of Iran. Iranian Journal of Plant Protection 44 (1): 27-39 [in Persian with English abs.].
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Motallebi P., Javan-Nikkhah M. and Okhovvat S. M. 2013. Characterization of Magnaporthe grisea populationsassociated with rice and weeds in Iran. Australaisian Plant Pathology. DOI 10.1007/s13313-013-0230-2
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Ahmadpour A., Pordel A., Heidarian Z. and Javan-Nikkhah M. 2013. Bipolaris coicis causing adlay leaf blight in Iran. Australasian Plant Disease Notes. DOI 10.1007/s13314-013-0116-8.
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Seifollahi E., Fotouhifar S. and Javan-Nikkhah M. 2013. Genetic diversity of Valsa malicola isolates assessed by microsatellite-primed PCR (MP-PCR). Archives of Phytopathology and Plant Protection:1-11. DOI: 10.1080/03235408.2013.866433
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Ahmadpour A., Heidarian Z., Karami S., Pordel A., Jabbarifar S. M., Tsukiboshi T., Zhang M. and Javan-Nikkhah M. 2013. New species of Bipolaris and Curvularia on grass species in Iran (3). Rostaniha 14(2): 216-228.
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Heidarian Z., Javan-Nikkhah M., Fotouhifar Kh. B. and Ahmadpour A. 2013. Morphological and phylogenetic investigation on selected Fusarium species belong to Gibberella fujikuroi species complex in Iran. Rostaniha 14(2): 216-228.163-174.
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Rahimi M., Sabbagh S. K., Javan-Nikkhah M., Soltanlou H., Salari M. and Panjakeh N. 2013. Study on the genetic diversity of ascochyta rabiei isolates, cause of chikpea blight disese in Lorestan province using SSR marker. Iranian Journal of Plant Protection 44(2): 273-282.
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Afsharmanesh H., Ahmadzadeh M., Javan-Nikkhah M., Behboudi K. 2014. Improving biocontrol activity of Bacillus subtilis UTB1 against Aspergillus flavus using gamma-irradiation. Crop Protection 60: 83-92.
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Sadeghy B., Javan-Nikkhah M. and Nayebyazdi N. 2014. Identify and relative virulence of seven Phytophthora spp. causing crown and root rot of citrus trees in Kerman, Iran. Archives Of Phytopathology And Plant Protection, 47(1): 69-74, DOI: 10.1080/03235408.2013.802897.
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